Allergy Testing · ALEX3

Food Allergy vs Food Intolerance — What's the Difference and Which Test Do You Need?

These two conditions are commonly confused — and that confusion leads to the wrong tests, unnecessary food elimination, and sometimes delayed diagnosis. A GP explains what separates them and what you should actually do if you react to food.

By Dr Raj Dhillon • October 2026 • 7 min read

What Is a Food Allergy?

A food allergy is an immune-system reaction to a specific food protein. When someone with a food allergy consumes the trigger food, their immune system recognises the protein as a threat and mounts a rapid IgE-mediated response. This response releases histamine and other chemicals that cause the characteristic allergic symptoms.

Key features of a true food allergy:

  • Fast onset: Symptoms typically appear within minutes and up to two hours of eating the trigger food
  • Immune-mediated: Involves IgE antibodies — measurable in a blood test
  • Dose-independent: Even a tiny amount of the allergen can trigger a reaction in sensitised individuals
  • Reproducible: The same food reliably triggers the same response
  • Potentially serious: Severe allergic reactions (anaphylaxis) are a medical emergency

Common food allergens in the UK: Peanuts, tree nuts (cashew, walnut, hazelnut), sesame, milk, egg, wheat, fish, shellfish, soy. The 14 major allergens must be declared on food labels under UK law.

What Is Food Intolerance?

Food intolerance is a fundamentally different condition. It is not IgE-mediated, does not involve the allergy arm of the immune system, and poses no risk of anaphylaxis. Instead, intolerances are typically:

  • Delayed: Symptoms may appear hours to days after eating the trigger food, making the connection hard to identify
  • Dose-dependent: Small amounts may be tolerated; larger amounts cause symptoms
  • Gut-focused: Bloating, gas, abdominal pain, and diarrhoea are typical
  • Variable: Can depend on overall gut health, stress, and other factors

Lactose intolerance — the inability to digest the milk sugar lactose due to insufficient lactase enzyme — is the most common example. Non-coeliac gluten sensitivity and fructose malabsorption are other examples. These are metabolic or functional issues, not immune responses.

Why IgG Food Intolerance Tests Are Not Recommended

Commercial IgG food intolerance tests are widely marketed — but they are not endorsed by any major allergy or immunology body, and the science does not support them.

IgG antibodies to foods are a normal finding in anyone who has eaten those foods regularly. Having IgG antibodies to wheat does not mean you are intolerant to wheat — it means your immune system has been exposed to wheat, which is expected. Using IgG levels to determine a "personalised" list of foods to avoid typically results in unnecessary restriction with no clinical benefit.

The British Society for Allergy and Clinical Immunology (BSACI), the British Dietetic Association, and the European Academy of Allergy and Clinical Immunology (EAACI) all advise against IgG food testing for the investigation of food intolerance.

What ALEX3 Actually Tests For

ALEX3 (Allergy Explorer 3) is a validated multiplex IgE testing platform that measures specific IgE antibodies to over 300 allergen components — including food allergens, pollen, pet dander, house dust mite, mould, and venom.

ALEX3 is a test for IgE-mediated allergy only. It is the most comprehensive validated blood test available for identifying true allergies, and it provides molecular component-level precision that standard RAST tests cannot match. It does not detect, diagnose, or measure food intolerance.

Food AllergyFood Intolerance
MechanismIgE-mediated immune responseNon-immune (enzyme, gut)
OnsetMinutes to 2 hoursHours to days
DoseTiny amounts trigger reactionUsually dose-dependent
RiskAnaphylaxis possibleNot life-threatening
Blood testALEX3 / specific IgENo validated test exists
DiagnosisIgE testing, skin prick, GP assessmentElimination diet, clinical history

Which Test Do You Need?

If you experience immediate reactions after eating — hives, swelling, vomiting, breathing difficulty within two hours of eating — a food allergy is the more likely diagnosis, and ALEX3 testing is appropriate.

If you experience delayed digestive symptoms — bloating, gas, abdominal pain hours after eating — food intolerance is more likely. The appropriate approach is a structured elimination diet with GP or dietitian guidance, not a blood test.

If you are unsure, book a GP appointment to discuss your symptoms. Our GP will take a clinical history and advise on the right investigative approach.

Frequently Asked Questions

A food allergy is an IgE-mediated immune reaction causing rapid symptoms (within minutes to 2 hours) — potentially including anaphylaxis. Food intolerance is a non-immune reaction causing delayed digestive symptoms. They are entirely different conditions requiring different management.

No validated blood test exists for food intolerance. Commercial IgG food tests are not endorsed by BSACI or any major allergy body and can lead to unnecessary dietary restriction. A structured elimination diet with GP or dietitian guidance is the evidence-based approach.

No. ALEX3 tests for IgE-mediated food allergies only. It identifies specific IgE antibodies to food allergen components. It does not detect food intolerance, IBS, non-coeliac gluten sensitivity, or lactose intolerance — these require different investigations.

The evidence-based approach is a GP-guided elimination diet with systematic reintroduction. For specific conditions: lactose intolerance is confirmed by hydrogen breath test or trial elimination; coeliac disease by anti-TTG antibody blood test and biopsy. Avoid commercial IgG panels — they are not clinically valid.
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Reacting to Food and Not Sure What's Causing It?

A GP assessment will help identify whether you're dealing with a true allergy, an intolerance, or something else entirely — and direct you to the right test or approach.

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